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They come in all shapes and modes: flow charts, quasi-geographical maps, 3-d simulator-like terrains and many others. The "web Stalker" is an experimental web browser which is equipped with mapping functions. The range of applicability is mind boggling.
A (very) partial list:
The Internet Genome Project - "open-source map of
major conceptual components of
Internet and how they relate to each other"
Anatomy of a Linux System - Aimed to "...give viewers a concise and comprehensive look at
Linux universe' and at
heart of
poster is a gravity well graphic showing
core software components,surrounded by explanatory text"
NewMedia 500 - The financial, strategic, and other inter-relationshipsand interactions between
leading 500 new (web) media firms
Internet Industry Map - Ownership and alliances determine status, control, and access in
Internet industry. A revealing organizational chart.
The Internet Weather Report measures Internet performance, latency periods and downtime based on a sample of 4000 domains.
Real Time Geographic Visualization of WWW Traffic - a stunning, 3-d representation of web usage and traffic statistics
world over.
WebBrain and Map.net provide a graphic rendition of
Open Directory Project. The thematic structure of
ODP is instantly discernible.
The WebMap is a visual, multi-category directory which contains 2,000,000 web sites. The user can zoom in and out of sub-categories and "unlock" their contents.
Maps help write fiction, trace a user's clickpath (replete with clickable web sites), capture Usenet and chat interactions (threads), plot search results (though Alta Vista discontinued its mapping service and Yahoo!3D is no more), bookmark web destinations, and navigate through complex sites.
Different metaphors are used as interface. Web sites are represented as plots of land, stars (whose brightness corresponds to
web site's popularity ranking), amino-acids in DNA-like constellations,topographical maps of
ocean depths, buildings in an urban landscape, or other objects in a pastoral setting. Virtual Reality (VR) maps allow information to be simultaneously browsed by teams of collaborators, sometimes represented as avatars in a fully immersive environment. In many applications,
user is expected to fly amongst
data items in virtual landscapes. With
advent of sophisticated GUI's (Graphic UserInterfaces) and VRML (Virtual Reality Markup Language) - these maps may well show us
way to a more colourful and user-friendly future.

Sam Vaknin is the author of Malignant Self Love - Narcissism Revisited and After the Rain - How the West Lost the East. He is a columnist for Central Europe Review, United Press International (UPI) and eBookWeb and the editor of mental health and Central East Europe categories in The Open Directory, Suite101 and searcheurope.com.
Visit Sam's Web site at http://samvak.tripod.com